BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007G04LP1|AL425751
(769 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1717 1486 0.0
>3x_Contig1717
Length = 18389
Score = 1486 bits (745), Expect = 0.0
Identities = 760/769 (98%)
Strand = Plus / Minus
Query: 1 gatcgtcatcatcatcattttcatcatcagaatcgttaccaacaggcgcattgaaatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13441 gatcgtcatcatcatcattttcatcatcagaatcgttaccaacaggcgcattgaaatttc 13382
Query: 61 ttctttttgctaatgcctcatccctcttgacttttctcaactcgacttgttgaacgtctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13381 ttctttttgctaatgcctcatccctcttgacttttctcaactcgacttgttgaacgtctc 13322
Query: 121 tacgacgacgtaattcatcagcagagaatctacccttattcttgaagtttgtcctcctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13321 tacgacgacgtaattcatcagcagagaatctacccttattcttgaagtttgtcctcctgt 13262
Query: 181 attcaggaacaaacttgctggaagtgtcaccgtccatctttcacttataaaataataaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13261 attcaggaacaaacttgctggaagtgtcaccgtccatctttcacttataaaataataaaa 13202
Query: 241 cggatacctgctatctgatccttcgtgctagccgcgaaccaaagaaaattcagagaagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13201 cggatacctgctatctgatccttcgtgctagccgcgaaccaaagaaaattcagagaagta 13142
Query: 301 aaaaaaaagattgthactaattcctttctaccaaactcacaatcacaattgatcgtcccg 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13141 aaaaaaaagattgtaactaattcctttctaccaaactcacaatcacaattgatcgtcccg 13082
Query: 361 tcttttcaagtagatatttttgcmaatgggttccaaatcaaacaaaaataaagagaagtt 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 13081 tcttttcaagtagatatttttgcaaatgggttccaaatcaaacaaaaataaagagaagtt 13022
Query: 421 ggatttaaagaagaaattatcagtcgcmaaatcaatctctaacaatcacaaatagcgttt 480
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 13021 ggatttaaagaagaaattatcagtcgcaaaatcaatctctaacaatcacaaatagcgttt 12962
Query: 481 ccccttgagttaatgamaatctgattcgtttctttgtattgcttgacagamaaatatatc 540
|||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 12961 ccccttgagtaaatgaaaatctgattcgtttctttgtattgcttgacagaaaaatatatc 12902
Query: 541 ggaagccaagagcaccgtattgttttatatatgtyacagtgtaattgaagtagaatgcca 600
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 12901 ggaagccaagagcaccgtattgttttatatatgtaacagtgtaattgaagtagaatgcaa 12842
Query: 601 accaatcttttattcaatcccatataatatccatcttgattaaaatccttcttttttggc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12841 accaatcttttattcaatcccatataatatccatcttgattaaaatccttcttttttggc 12782
Query: 661 catccaaaaaattcgaatttttttttttggttgaaatttctttgccagatagtcgtgatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12781 catccaaaaaattcgaatttttttttttggttgaaatttctttgccagatagtcgtgatg 12722
Query: 721 tacggagttgtcacgtgacataccaacctcgtgtwagaaaacgacaaag 769
|||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 12721 tacggagttgtcacgtgacataccaacctcgtgtaagaaaacgacaaag 12673
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,018
Number of Sequences: 1807
Number of extensions: 14018
Number of successful extensions: 488
Number of sequences better than 1.0e-20: 1
length of query: 769
length of database: 10,358,551
effective HSP length: 16
effective length of query: 753
effective length of database: 10,329,639
effective search space: 7778218167
effective search space used: 7778218167
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)